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EDP06541 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06541" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06541Predicted protein (419 aa)    
Predicted Functional Partners:
EDP03040
Predicted protein (304 aa)
     
        0.558
EDP01375
Predicted protein (200 aa)
     
        0.506
EDP08060
Predicted protein (455 aa)
     
        0.479
DAT1
Dicarboxylate/amino acid cation sodium transporter (423 aa)
     
        0.477
EDP07008
Predicted protein (265 aa)
     
        0.477
EDP04402
Predicted protein (517 aa)
     
        0.475
EDP01193
Predicted protein (551 aa)
     
        0.475
SEC6
Component of the exocyst complex (763 aa)
     
        0.475
CYP739A3
Cytochrome P450, CYP85 clan (549 aa)
     
        0.456
EDP00845
Predicted protein (428 aa)
     
   
  0.445
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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