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EDP06545 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06545" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06545Predicted protein (579 aa)    
Predicted Functional Partners:
EDP06649
Predicted protein (353 aa)
   
 
  0.956
MRPL19
Mitochondrial ribosomal protein L19 (312 aa)
   
  0.941
PRPL9
Plastid ribosomal protein L9 (204 aa)
     
    0.931
MRPL20
Mitochondrial ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (115 aa)
   
  0.931
rpl20
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (By similarity) (112 aa)
   
  0.931
PRPL4
Plastid ribosomal protein L4 (243 aa)
     
  0.931
PRPL3
Plastid ribosomal protein L3 (259 aa)
     
  0.924
PRPL13
Plastid ribosomal protein L13 (225 aa)
   
  0.922
PRPL17
Plastid ribosomal protein L17 (173 aa)
     
  0.921
PRPL11
Plastid ribosomal protein L11 (176 aa)
   
  0.917
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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