STRINGSTRING
EDP06554 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06554" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06554Predicted protein (1353 aa)    
Predicted Functional Partners:
EDP02169
Predicted protein (349 aa)
     
        0.538
DNL4
DNA ligase IV (831 aa)
     
        0.536
Sat1
Serine acetyltransferase (392 aa)
     
        0.511
EDO98264
Predicted protein (1198 aa)
     
        0.479
CSA6
Predicted protein of CSA family (196 aa)
     
        0.475
EDP01796
Predicted protein (512 aa)
     
        0.475
EDP08971
Predicted protein (362 aa)
     
        0.442
SUOX1
Sulfite oxidase (605 aa)
     
        0.415
EDP07786
Predicted protein (138 aa)
     
        0.405
EDP01228
Predicted protein (839 aa)
     
        0.404
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (2%) [HD]