STRINGSTRING
EDP06607 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06607" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06607Predicted protein (939 aa)    
Predicted Functional Partners:
USE1
Qc-SNARE protein, USE1 family (482 aa)
     
        0.665
EDP02816
Predicted protein (804 aa)
     
        0.648
EDO98845
Predicted protein (471 aa)
     
        0.648
EDP08804
Predicted protein (1010 aa)
     
        0.584
SSA7
Predicted protein (765 aa)
     
        0.564
EDP06461
Predicted protein (414 aa)
     
        0.558
EDO96472
Predicted protein (546 aa)
     
        0.541
EDO98194
Predicted protein (358 aa)
     
        0.523
TRF4
Trf4 poly(A) polymerase (1144 aa)
     
        0.521
EDP09291
Predicted protein (294 aa)
     
        0.518
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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