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UROD2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"UROD2" - Uroporphyrinogen decarboxylase in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UROD2Uroporphyrinogen decarboxylase (394 aa)    
Predicted Functional Partners:
CPX2
Coproporphyrinogen III oxidase (349 aa)
   
 
  0.993
CPX1
Coproporphyrinogen III oxidase (365 aa)
   
 
  0.992
EDP06162
Predicted protein (401 aa)
       
  0.957
PBGD1
Porphobilinogen deaminase (349 aa)
 
  0.947
ALAD
Delta-aminolevulinic acid dehydratase (390 aa)
 
 
  0.944
UROD1
Uroporphyrinogen-iii decarboxylase (390 aa)
   
 
0.926
UROS
Uroporphyrinogen-iii synthase (297 aa)
     
 
  0.922
GSA
Glutamate-1-semialdehyde aminotransferase (463 aa)
 
   
  0.920
CHLD
Magnesium chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg- protoporphyrin IX (767 aa)
   
   
  0.881
PPX1
Protoporphyrinogen oxidase (563 aa)
 
   
  0.873
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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