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VPS4 protein (Chlamydomonas reinhardtii) - STRING interaction network
"VPS4" - AAA-ATPase of VPS4/SKD1 family in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
VPS4AAA-ATPase of VPS4/SKD1 family (436 aa)    
Predicted Functional Partners:
VPS46
Subunit of the ESCRT-III complex (199 aa)
     
  0.998
VPS60
Subunit of the ESCRT-III complex (166 aa)
     
  0.997
SNF7
Component of the ESCRT-III complex (222 aa)
     
  0.995
VPS20
Subunit of ESCRT-III complex (232 aa)
     
  0.994
EDP01518
Predicted protein (196 aa)
     
  0.993
VPS24
Subunit of the ESCRT-III complex (220 aa)
     
  0.991
VPS2B
Subunit of the ESCRT-III complex (215 aa)
     
  0.991
VPS2A
Subunit of the ESCRT-III complex (223 aa)
     
  0.986
VPS28
Subunit of the ESCRT-I complex (225 aa)
     
  0.962
EDO97226
Programmed cell death protein 6-interacting protein (801 aa)
     
  0.954
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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