STRINGSTRING
EDP06657 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06657" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06657Predicted protein (629 aa)    
Predicted Functional Partners:
UBQ4
Ubiquitin (242 aa)
     
  0.898
UBQ2
Bi-ubiquitin (153 aa)
     
  0.896
UBQ7
Ubiquitin-fusion protein (338 aa)
     
  0.893
UBQ6
Ubiquitin fusion protein (805 aa)
     
  0.893
UBQ1a
Bi-ubiquitin, major isoform (153 aa)
     
  0.893
UBQ3
Bi-ubiquitin (244 aa)
     
  0.893
EDO99092
Predicted protein (236 aa)
     
  0.755
RPN2
26S proteasome regulatory subunit (1037 aa)
     
   
  0.755
EDP00999
Predicted protein (370 aa)
     
  0.745
EDO97905
Predicted protein (634 aa)
     
 
  0.733
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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