STRINGSTRING
EDP06677 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06677" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06677Predicted protein (175 aa)    
Predicted Functional Partners:
DNJ16
DnaJ-like protein (415 aa)
     
        0.514
EDP03037
Predicted protein (686 aa)
     
        0.480
EDP05831
Predicted protein (156 aa)
     
        0.477
WWP1
WW domain protein (746 aa)
     
        0.475
DNJ4
DnaJ-like protein (253 aa)
     
        0.475
EDP05271
RNA processing protein (511 aa)
     
        0.440
SPL8
U2 snRNP auxiliary factor, large subunit (306 aa)
     
        0.430
EDP02584
Predicted protein (259 aa)
     
        0.429
EDP06317
Predicted protein (1084 aa)
     
        0.427
EDP08434
poly(A) binding protein (136 aa)
     
        0.424
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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