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EDP06690 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06690" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06690Predicted protein (795 aa)    
Predicted Functional Partners:
RNB1
3’-5’ exoribonuclease (1061 aa)
     
   
  0.898
EDO96190
Predicted protein (284 aa)
     
   
  0.883
RNB2
3’-5’ exoribonuclease II (699 aa)
     
   
  0.820
EDP01505
Predicted protein (299 aa)
     
   
  0.807
EDP08895
Predicted protein (277 aa)
           
  0.786
POL1A
PolI-like DNA polymerase (498 aa)
     
   
  0.748
CGLD20
Predicted protein (497 aa)
           
  0.733
TRF4
Trf4 poly(A) polymerase (1144 aa)
     
   
  0.723
PAP1
Poly(a) polymerase (407 aa)
           
  0.712
EDP00815
Predicted protein (218 aa)
     
        0.672
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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