STRINGSTRING
CGL40 protein (Chlamydomonas reinhardtii) - STRING interaction network
"CGL40" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CGL40Predicted protein (146 aa)    
Predicted Functional Partners:
EDP00356
Predicted protein (65 aa)
     
        0.720
EDP00355
Predicted protein (138 aa)
     
        0.720
EDP08645
cytosine-C5 specific DNA methyltransferase (1263 aa)
     
        0.719
EDP04666
ARF/Sar1-like GTPase (289 aa)
     
        0.716
LCI33
low-CO2-inducible protein (886 aa)
     
        0.711
EDO97652
Predicted protein (533 aa)
     
        0.709
CST1
Membrane transporter (169 aa)
     
        0.704
EDP00917
Predicted protein (114 aa)
     
        0.701
EDP05725
Predicted protein (98 aa)
     
        0.700
CGLD17
Predicted protein (928 aa)
     
        0.690
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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