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EDP06719 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06719" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06719Predicted protein (151 aa)    
Predicted Functional Partners:
SEC13L
COP-II coat subunit, nucleoporin (338 aa)
     
  0.992
SEC13
COP-II coat subunit (299 aa)
     
  0.989
NUP155
Nuclear pore protein (868 aa)
     
  0.959
EDO96335
Predicted protein (540 aa)
     
  0.949
RAE1
mRNA export protein (352 aa)
     
  0.947
EDP02867
Predicted protein (450 aa)
     
  0.941
EDP01555
Predicted protein (662 aa)
     
  0.850
IPB1
Importin beta (832 aa)
     
 
  0.845
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
      0.829
EDP00317
RAN GTPase activating protein, RANGAP1 (498 aa)
     
 
  0.806
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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