STRINGSTRING
PANC protein (Chlamydomonas reinhardtii) - STRING interaction network
"PANC" - Pantothenate synthetase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PANCPantothenate synthetase (199 aa)    
Predicted Functional Partners:
EDP03518
Predicted protein (673 aa)
         
  0.958
PANB
Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is tranferred onto alpha-ketoisovalerate to form ketopantoate (441 aa)
 
 
  0.928
EDP09078
Predicted protein (440 aa)
       
  0.906
EDP05401
Aldehyde dehydrogenase (536 aa)
       
  0.904
CGL14
Protein of pantothenate kinase family (441 aa)
         
  0.902
EDP09706
Beta-ureidopropionase (393 aa)
         
  0.902
RFK2
Riboflavin kinase (399 aa)
           
  0.825
EDP05064
Riboflavin kinase (421 aa)
           
  0.825
PYR5
Uridine 5’-monophosphate synthase (474 aa)
   
 
  0.823
ATS2
ATP-sulfurylase (429 aa)
           
  0.644
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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