STRINGSTRING
SSA18 protein (Chlamydomonas reinhardtii) - STRING interaction network
"SSA18" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SSA18Predicted protein (300 aa)    
Predicted Functional Partners:
ARH1
NADP adrenodoxin-like ferredoxin reductase (525 aa)
 
 
        0.640
EDO96736
Predicted protein (485 aa)
     
        0.545
EDP02864
DNA-directed RNA polymerase III, subunit 2; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1161 aa)
     
        0.498
EDO99365
Predicted protein (1640 aa)
     
        0.477
EDP03821
Predicted protein (1068 aa)
     
        0.475
EDP06043
Predicted protein; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1167 aa)
     
        0.462
EDP09050
Predicted protein (548 aa)
     
        0.440
EDP04014
Predicted protein (931 aa)
     
        0.424
EDO96442
Predicted protein (150 aa)
     
        0.419
EDP03720
Predicted protein (154 aa)
     
        0.400
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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