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EDP06779 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06779" - U2 snRNP auxiliary factor, large subunit in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06779U2 snRNP auxiliary factor, large subunit (309 aa)    
Predicted Functional Partners:
EDP08396
U2 snRNP auxiliary factor, small subunit (273 aa)
     
  0.995
PRP19
Spliceosome component, nuclear pre-mRNA splicing factor (503 aa)
     
  0.978
EDO98006
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (1085 aa)
     
  0.976
EDP03322
Predicted protein (811 aa)
     
  0.974
EDP02964
Predicted protein (110 aa)
     
  0.957
EDP01981
Predicted protein (110 aa)
     
  0.957
PRP17
Nuclear pre-mRNA splicing factor, component of the spliceosome (313 aa)
     
  0.947
EDO97736
Predicted protein (865 aa)
     
0.939
SMP12
U1 small nuclear ribonucleoprotein (394 aa)
     
  0.926
EDO96746
Nuclear pre-mRNA splicing factor, component of splicing factor 3b (444 aa)
     
  0.918
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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