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EDP06780 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06780" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06780Predicted protein (882 aa)    
Predicted Functional Partners:
EDP00213
Predicted protein (338 aa)
     
  0.951
LRG5
Predicted protein (681 aa)
     
  0.947
GPIT1
Glycosyl phosphatidyl inositol transamidase subunit (774 aa)
     
  0.945
EDP05671
Predicted protein (693 aa)
   
 
    0.628
EDO96531
Predicted protein (153 aa)
       
      0.571
GTR1
Glycosyl transferase (254 aa)
   
 
  0.557
TOP2
DNA topoisomerase II; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1167 aa)
   
        0.512
GTR14
Glycosyl transferase (378 aa)
     
   
  0.484
PIA1
N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase (300 aa)
     
   
  0.474
SQD2
Sulfolipid synthase (402 aa)
     
   
  0.472
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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