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EDP06790 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06790" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06790Predicted protein (747 aa)    
Predicted Functional Partners:
DNJ2
DnaJ-like protein (458 aa)
     
        0.537
VPS11
Subunit of VPS-C complex (1102 aa)
     
        0.517
TML1
R-SNARE protein, tomsyn-like family (1204 aa)
     
        0.503
EDP09332
Predicted protein (702 aa)
     
        0.483
EDP02723
Predicted protein (2516 aa)
     
        0.479
EDP03842
Predicted protein (982 aa)
     
        0.476
EDP02370
Predicted protein (629 aa)
     
        0.476
EDP01737
Predicted protein (704 aa)
     
        0.475
EDO96309
Predicted protein (319 aa)
     
        0.475
EDP02899
Hypothetical protein (618 aa)
     
        0.428
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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