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EDP06823 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06823" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06823Predicted protein (467 aa)    
Predicted Functional Partners:
EDP04681
Predicted protein (400 aa)
     
        0.530
COG4
Component of oligomeric golgi complex 4 (1094 aa)
     
        0.525
COG6
Component of oligomeric golgi complex 6 (681 aa)
     
        0.513
EDO96508
Predicted protein (1454 aa)
     
        0.510
EDO97960
Predicted protein (516 aa)
     
        0.508
EDP04997
Potential GTPase activation protein (1138 aa)
     
        0.507
SEC24B
COP-II coat subunit (1080 aa)
     
        0.480
SEC23B
COP-II coat subunit (682 aa)
     
        0.480
EDP00387
Predicted protein (392 aa)
     
        0.477
EDP09223
NEF1-like protein (1346 aa)
     
        0.475
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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