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NOP1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"NOP1" - Nucleolar protein, component of C/D snoRNPs in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NOP1Nucleolar protein, component of C/D snoRNPs (315 aa)    
Predicted Functional Partners:
NOP58
Nucleolar protein, component of C/D snoRNPs (508 aa)
   
  0.999
NOP56
Nucleolar protein, component of C/D snoRNPs (498 aa)
 
  0.999
CBF5
Centromere/microtubule binding protein (435 aa)
   
 
  0.998
NHP2
Nucleolar protein, small subunit of H/ACA snoRNPs (162 aa)
     
  0.998
EDP01097
Predicted protein (181 aa)
     
 
  0.996
EDO98824
Predicted protein (207 aa)
   
 
  0.995
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
  0.993
SPL5
pre-mRNA-splicing factor (488 aa)
 
  0.990
EDP03163
Predicted protein (514 aa)
     
  0.990
EDP08133
Predicted protein (583 aa)
     
  0.988
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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