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TRK1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"TRK1" - Transketolase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRK1Transketolase (718 aa)    
Predicted Functional Partners:
TAL2
Transaldolase (399 aa)
   
  0.997
RPE1
Ribulose phosphate-3-epimerase, chloroplast precursor (265 aa)
 
  0.994
RPE2
Ribulose phosphate-3-epimerase (254 aa)
 
  0.993
GAP3
Glyceraldehyde-3-phosphate dehydrogenase (374 aa)
   
  0.993
SEBP1
Sedoheptulose-1,7-bisphosphatase (389 aa)
   
 
  0.992
GAP1a
Glyceraldehyde 3-phosphate dehydrogenase, dominant splicing variant (371 aa)
   
  0.990
GAP2
Glyceraldehyde 3-phosphate dehydrogenase (347 aa)
   
  0.990
FBP1
Fructose-1,6-bisphosphatase (415 aa)
   
 
  0.987
FSA1
fructose-6-P aldolase (279 aa)
   
  0.986
PGI1
Phosphoglucose isomerase (646 aa)
   
  0.984
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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