STRINGSTRING
EDP06857 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06857" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06857Predicted protein (656 aa)    
Predicted Functional Partners:
CDKE1
Cyclin dependent kinase (316 aa)
       
  0.899
EDO97905
Predicted protein (634 aa)
     
      0.718
EDP03772
Predicted protein (144 aa)
     
  0.610
CYCC1
C-type cyclin (216 aa)
     
  0.602
CYCM1
Cyclin (473 aa)
       
  0.592
CYCL1
L-type cyclin (251 aa)
       
  0.592
CYCT1
T-type cyclin (293 aa)
       
  0.592
RLS8
Hypothetical protein (454 aa)
     
        0.512
EDP00744
Predicted protein (1011 aa)
     
        0.509
EDO97475
Predicted protein (683 aa)
     
        0.507
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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