STRINGSTRING
EDP06894 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06894" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06894Predicted protein (643 aa)    
Predicted Functional Partners:
EDP03610
Predicted protein (557 aa)
     
        0.507
EDP01612
Predicted protein (615 aa)
     
        0.502
EDO97941
Predicted protein (660 aa)
     
        0.478
EDO99647
Predicted protein (477 aa)
     
        0.477
CLR15
Predicted protein of CLR family (728 aa)
     
        0.417
BOR1
Borate transporter (497 aa)
     
        0.410
EDP04028
Predicted protein (883 aa)
     
        0.410
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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