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EDP06898 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06898" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06898Predicted protein (191 aa)    
Predicted Functional Partners:
TF2H2
Transcription factor TFIIH, 44 kDa subunit (413 aa)
     
        0.659
EDP09484
Predicted protein (208 aa)
     
        0.653
EDP06899
Predicted protein (93 aa)
     
        0.649
RPB11
DNA-directed RNA polymerase II, 13.6 kDa polypeptide (115 aa)
     
        0.639
RPB9
DNA-directed RNA polymerase II, 14.5 kDa polypeptide; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (118 aa)
     
        0.593
EDO97514
Predicted protein (247 aa)
     
        0.519
EDP04989
Predicted protein (597 aa)
     
        0.514
CGL49
ARF/SAR superfamily small monomeric GTP binding protein (186 aa)
     
        0.502
CDKH1
Cyclin dependent kinase (439 aa)
     
        0.498
EDP09252
Predicted protein (167 aa)
     
        0.480
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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