STRINGSTRING
EDP06932 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06932" - ATM/ATR-like kinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06932ATM/ATR-like kinase (4723 aa)    
Predicted Functional Partners:
EDO97231
Predicted protein (142 aa)
     
  0.984
EDP08347
Histone acetyltransferase (517 aa)
     
  0.978
EDO99716
Predicted protein (154 aa)
       
  0.976
EDP01523
Predicted protein (366 aa)
     
  0.970
EDP00682
Transcription initiation factor TFIID, subunit TAF5 (522 aa)
     
  0.967
EDP05135
SNF2 superfamily protein (1610 aa)
     
  0.967
EDP03314
Predicted protein (578 aa)
     
  0.967
EDP01544
MYST family histone acetyltransferase (415 aa)
     
  0.965
EDP03495
Predicted protein (121 aa)
     
  0.965
EDP08877
Histone acetyltransferase (279 aa)
       
  0.962
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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