STRINGSTRING
EDP06938 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06938" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06938Predicted protein (54 aa)    
Predicted Functional Partners:
EDP01939
Predicted protein (435 aa)
     
  0.903
EDO98856
Predicted protein (179 aa)
     
  0.899
EDP07947
Predicted protein (356 aa)
     
  0.887
TF2H2
Transcription factor TFIIH, 44 kDa subunit (413 aa)
     
  0.884
TFB4
TFIIH 34kDa subunit (169 aa)
     
  0.882
EDP05525
Predicted protein (224 aa)
       
  0.880
EDP06523
Predicted protein; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation (119 aa)
       
    0.865
RFC1
DNA replication factor C complex subunit 1 (1182 aa)
   
  0.860
EDO95757
Predicted protein (142 aa)
     
  0.842
EDP05379
Predicted protein (73 aa)
     
  0.819
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (10%) [HD]