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SEC24A protein (Chlamydomonas reinhardtii) - STRING interaction network
"SEC24A" - COP-II coat subunit in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEC24ACOP-II coat subunit (820 aa)    
Predicted Functional Partners:
SEC23A
COP-II coat subunit (762 aa)
     
0.998
SEC31
COP-II coat subunit (1313 aa)
     
  0.997
SEC13
COP-II coat subunit (299 aa)
     
  0.995
SEC24B
COP-II coat subunit (1080 aa)
     
 
0.964
SAR1
Sar-type small GTPase (192 aa)
     
  0.937
SEC22
R-SNARE protein, Sec22-family (219 aa)
     
  0.911
SEC24C
COP-II coat subunit (825 aa)
     
 
  0.822
EDP07241
Cmp24/gp25L/p24 family protein (212 aa)
     
  0.805
SYP3
Qa-SNARE protein, Sed5/Syntaxin5-family (339 aa)
     
  0.798
EDO98460
EMB30/GNOM-like protein (1490 aa)
     
 
  0.794
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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