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DEG2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"DEG2" - DegP-type protease in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DEG2DegP-type protease (626 aa)    
Predicted Functional Partners:
ANK11
Predicted protein (152 aa)
     
  0.789
RPN3
26S proteasome regulatory subunit (488 aa)
     
    0.778
SUB1
Secreted protease and protease inhibitor (951 aa)
   
   
  0.773
EDP03665
Predicted protein (400 aa)
     
  0.755
CSN2
COP9 signalosome subunit (437 aa)
     
    0.750
RPN6
26S proteasome regulatory subunit (421 aa)
     
    0.737
DMC1
Rad51-like protein (343 aa)
   
   
  0.696
EDO97559
Predicted protein (348 aa)
     
        0.676
EDP09460
Predicted protein (217 aa)
     
        0.670
EDO98031
Predicted protein (164 aa)
     
        0.669
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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