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EDP06988 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP06988" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP06988Predicted protein (235 aa)    
Predicted Functional Partners:
TIG1
Chloroplast trigger factor (548 aa)
       
 
  0.906
RPL35
Ribosomal protein L35 (130 aa)
       
 
  0.901
HDPT1
Histidine-aspartic acid phosphotransferase 1 (151 aa)
       
  0.896
RPL23a
Ribosomal protein L23a (147 aa)
       
 
  0.839
rpl23
Ribosomal protein L23; Binds to 23S rRNA (95 aa)
       
 
  0.839
EDO98496
Predicted protein (107 aa)
 
  0.837
RPL11
Ribosomal protein L11 (178 aa)
       
      0.837
rpl5
Ribosomal protein L5; Binds 5S rRNA, forms part of the central protuberance of the 50S subunit (187 aa)
       
      0.837
THD1
Threonine deaminase (631 aa)
     
      0.835
STD1
Serine/threonine dehydratase (340 aa)
     
      0.835
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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