STRINGSTRING
EDP07017 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07017" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07017Predicted protein (140 aa)    
Predicted Functional Partners:
EDP01228
Predicted protein (839 aa)
     
        0.519
EDO96319
Predicted protein (232 aa)
     
        0.504
EDO98625
Predicted protein (474 aa)
     
        0.479
DNL4
DNA ligase IV (831 aa)
     
        0.478
EDP01796
Predicted protein (512 aa)
     
        0.475
EDO97560
Predicted protein (91 aa)
     
        0.475
EDO97545
Predicted protein (299 aa)
     
        0.475
EDO98238
Predicted protein (66 aa)
     
        0.429
GTR24
Glycosyl transferase; ceramide glucosyltransferase (1001 aa)
     
        0.419
EDP02624
Predicted protein (451 aa)
     
        0.412
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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