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UBC2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"UBC2" - Ubiquitin-conjugating enzyme E2 in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UBC2Ubiquitin-conjugating enzyme E2 (139 aa)    
Predicted Functional Partners:
UBC9
Ubiquitin conjugating enzyme (148 aa)
     
  0.979
EDO99861
Predicted protein (153 aa)
     
  0.977
EDP09748
Predicted protein (158 aa)
     
  0.977
EDP08722
Predicted protein (156 aa)
     
  0.977
EDO97335
Predicted protein (155 aa)
     
  0.977
UBC4
E2 ubiquitin-conjugating-like enzyme (159 aa)
     
  0.916
EDP09237
Predicted protein (192 aa)
     
  0.914
UBC3
E2 ubiquitin-conjugating enzyme (163 aa)
     
  0.914
UBC10
Ubiquitin-conjugating enzyme (163 aa)
     
  0.885
EDO96521
Predicted protein (154 aa)
     
  0.885
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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