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EDP07085 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07085" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07085Predicted protein (1200 aa)    
Predicted Functional Partners:
RPB1
DNA-directed RNA polymerase II, largest subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
     
  0.907
EDP09795
Global transcription factor (1188 aa)
     
  0.841
CDKD1
CDK activating kinase (353 aa)
     
  0.816
EDO97122
Predicted protein (70 aa)
     
  0.811
EDP08459
Predicted protein (462 aa)
     
      0.731
CYCC1
C-type cyclin (216 aa)
     
  0.705
EDP03772
Predicted protein (144 aa)
     
  0.699
EDP01939
Predicted protein (435 aa)
     
 
    0.692
EDP07483
Predicted protein (343 aa)
       
      0.685
TRN1
Transportin (898 aa)
       
      0.685
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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