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EDP07113 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07113" - DNA-directed RNA polymerase subunit beta in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07113DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (720 aa)    
Predicted Functional Partners:
RPA1
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1515 aa)
 
 
  0.999
EDP06043
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1167 aa)
 
 
  0.996
EDP06717
Predicted protein (201 aa)
     
 
  0.995
EDP00191
Predicted protein (662 aa)
     
 
  0.995
NOP58
Nucleolar protein, component of C/D snoRNPs (508 aa)
   
 
  0.993
EDP02318
Predicted protein (1017 aa)
     
   
  0.992
EDP00663
60S ribosome subunit biogenesis protein NIP7 homolog; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (179 aa)
     
 
  0.990
RPB5
DNA-directed RNA polymerase II, 23 kDa polypeptide (206 aa)
   
 
  0.987
EDP06485
RNA binding rRNA processing protein (1280 aa)
     
 
  0.987
EDP08133
Predicted protein (583 aa)
     
 
  0.983
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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