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EDP07135 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07135" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07135Predicted protein (109 aa)    
Predicted Functional Partners:
EDP08515
Histone H2B (153 aa)
     
        0.661
EDO97530
Histone H2B (153 aa)
     
        0.661
EDP08150
Histone H2B (153 aa)
     
        0.580
EDO95750
Histone H2B (153 aa)
     
        0.580
EDP08500
Histone H2B (153 aa)
     
        0.508
EDO98378
Predicted protein (198 aa)
     
        0.503
HTB14
Histone H2B; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling (153 aa)
     
        0.497
EDP08169
Histone H2B (153 aa)
     
        0.475
EDO96277
Predicted protein (186 aa)
     
        0.421
EDP05266
Histone H2B (153 aa)
     
        0.418
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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