STRINGSTRING
AP2S2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"AP2S2" - Sigma2-Adaptin in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AP2S2Sigma2-Adaptin (143 aa)    
Predicted Functional Partners:
AP2A1
Alpha-adaptin (953 aa)
     
  0.997
AP2M2
Mu2-Adaptin (438 aa)
     
  0.987
AP1M1
Mu1-Adaptin (425 aa)
     
  0.983
AP4B4
Beta-4-adaptin (858 aa)
     
  0.980
AP1B1
Hypothetical protein (186 aa)
       
  0.980
AP1G1
Gamma-adaptin (850 aa)
     
  0.883
AP4E1
Epsilon-adaptin (925 aa)
       
  0.881
STPK7
Serine/threonine protein kinase 7 (398 aa)
       
  0.857
COPB1
Beta-cop; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (959 aa)
     
  0.848
EDP09063
Predicted protein (103 aa)
     
    0.737
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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