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PDK3 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PDK3" - Mitochondrial pyruvate dehydrogenase kinase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDK3Mitochondrial pyruvate dehydrogenase kinase (401 aa)    
Predicted Functional Partners:
PDC1
Mitochondrial pyruvate dehydrogenase complex, E1 component, alpha subunit (497 aa)
     
  0.901
EDP02990
Mitochondrial branched-chain alpha-ketoacid dehydrogenase complex, E1 alpha (356 aa)
     
  0.898
DLA3
Dihydrolipoamide acetyltransferase (643 aa)
   
  0.871
DLA1
Dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2) (628 aa)
     
  0.866
DLA2
Dihydrolipoamide acetyltransferase (415 aa)
     
  0.866
EDO98796
Predicted protein (705 aa)
     
  0.848
HDPT1
Histidine-aspartic acid phosphotransferase 1 (151 aa)
       
 
  0.830
EDP08395
Predicted protein (69 aa)
   
 
  0.801
EDP01312
Predicted protein (146 aa)
   
 
  0.801
EDP06988
Predicted protein (235 aa)
   
  0.776
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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