STRINGSTRING
EDP07159 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07159" - Thylakoid membrane protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07159Thylakoid membrane protein (141 aa)    
Predicted Functional Partners:
TEF30
Predicted protein (360 aa)
     
   
  0.860
TEF3
Predicted protein (333 aa)
     
 
  0.821
CGL71
Predicted protein (258 aa)
     
   
  0.814
CGL5
Predicted protein (290 aa)
   
        0.793
EDO97624
Predicted protein (592 aa)
     
   
  0.790
TEF5
Rieske [2Fe-2S] protein (306 aa)
     
   
  0.771
PSBO
Oxygen-evolving enhancer protein 1, chloroplastic; Stabilizes the manganese cluster which is the primary site of water splitting (291 aa)
   
   
  0.739
PSB28
Photosystem II reaction center Psb28 protein; Photosystem II subunit 28 ; Belongs to the Psb28 family (144 aa)
     
        0.710
EDP06798
Predicted protein (110 aa)
     
        0.702
CGLD14
Predicted protein (258 aa)
     
   
  0.695
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, SAG 53.72 [[Chlamydomonas smithii]], SAG 54.72 [[Chlamydomonas smithii]], UTEX 90
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