STRINGSTRING
EDP07162 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07162" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07162Predicted protein (766 aa)    
Predicted Functional Partners:
EDO97964
Predicted protein (496 aa)
     
        0.594
EDP04144
Predicted protein (1362 aa)
     
        0.569
POL1A
PolI-like DNA polymerase (498 aa)
     
        0.518
PRKDC
DNA dependent protein kinase catalytic subunit (1431 aa)
     
        0.509
SMG1
Phosphatidylinositol 3-kinase-related protein kinase (4881 aa)
     
   
  0.507
EDP06932
ATM/ATR-like kinase (4723 aa)
     
   
  0.506
EDP00898
Predicted protein (285 aa)
     
        0.505
EDO98034
Predicted protein (188 aa)
     
        0.505
PFK3
Phosphofructokinase (1005 aa)
     
        0.505
EDP08005
Predicted protein (3780 aa)
     
        0.504
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (7%) [HD]