STRINGSTRING
EDP07168 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07168" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07168Predicted protein (231 aa)    
Predicted Functional Partners:
EDP03014
Predicted protein (343 aa)
     
  0.994
EDP00090
Predicted protein (456 aa)
     
        0.856
EDP00658
Predicted protein (328 aa)
     
   
  0.844
EDP05150
Predicted protein (254 aa)
     
   
  0.841
TRM4
tRNA-(m5C) methyltransferase (392 aa)
     
   
  0.835
EDP07082
Predicted protein (163 aa)
     
        0.796
EDO99394
Predicted protein (268 aa)
     
 
  0.774
EDP05821
Predicted protein (924 aa)
     
        0.758
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
   
  0.757
EDO96263
Predicted protein (494 aa)
     
        0.757
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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