STRINGSTRING
EDP07175 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07175" - Translocon-associated protein beta in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07175Translocon-associated protein beta (226 aa)    
Predicted Functional Partners:
EDO97810
Translocon-associated protein alpha subunit (244 aa)
     
 
    0.941
EDP01255
Hypothetical membrane protein (522 aa)
           
  0.805
ARP3
Actin-related protein (432 aa)
           
  0.799
SNE6
UDP-glucose 4-epimerase (349 aa)
     
   
  0.755
EZY17
Predicted protein (241 aa)
           
  0.737
EDP08842
Predicted protein (93 aa)
     
        0.720
SEC61B
SEC61-beta subunit of ER-translocon (89 aa)
     
        0.720
EDP06240
Phosphate/phosphoenolpyruvate translocator protein (346 aa)
     
        0.720
SEC61A
SEC61-alpha subunit of ER-translocon (476 aa)
     
        0.720
EDP04675
Predicted protein (229 aa)
     
        0.720
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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