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RBL10 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RBL10" - Rhomboid-like protease in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBL10Rhomboid-like protease (440 aa)    
Predicted Functional Partners:
FUM1
Fumarate hydratase (589 aa)
   
   
  0.693
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
     
   
  0.616
GSF1
Ferredoxin-dependent glutamate synthase (1552 aa)
     
   
  0.584
EDP06649
Predicted protein (353 aa)
   
        0.542
EDP06819
Predicted protein (717 aa)
   
        0.480
LKHA4
Leukotriene A-4 hydrolase (543 aa)
   
        0.466
CYN19-1
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (178 aa)
   
 
  0.447
CYN65
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (623 aa)
   
 
  0.420
EDP03403
Predicted protein (513 aa)
   
   
  0.419
CYN40
Peptidyl-prolyl cis-trans isomerase, cyclophilin-type (377 aa)
     
 
  0.400
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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