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RBD1 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RBD1" - Rubredoxin in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RBD1Rubredoxin (169 aa)    
Predicted Functional Partners:
ERM6
ERD4-related membrane protein (1746 aa)
           
  0.807
RBD2
Rubredoxin (117 aa)
           
  0.807
EDP03485
Flavodoxin-like protein (548 aa)
         
  0.739
EDO98775
Flavoprotein (539 aa)
         
  0.739
HNR1
Heterogeneous nuclear ribonucleoprotein (295 aa)
           
  0.712
TEF5
Rieske [2Fe-2S] protein (306 aa)
     
 
  0.568
PRF1
Pyruvate-ferredoxin oxidoreductase (1181 aa)
         
  0.550
BIP1
Binding protein 1 (656 aa)
           
  0.505
NTRC1
NADPH-dependent thioredoxin reductase (517 aa)
   
   
  0.501
EDP06968
Rieske ferredoxin (145 aa)
     
 
  0.489
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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