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PUS8 protein (Chlamydomonas reinhardtii) - STRING interaction network
"PUS8" - Pseudouridine synthase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUS8Pseudouridine synthase (241 aa)    
Predicted Functional Partners:
PUS5
Pseudouridine synthase (694 aa)
   
  0.589
EDO99606
Predicted protein (420 aa)
   
   
  0.588
EDO99099
Predicted protein (507 aa)
   
        0.585
PUS3
RNA pseudouridine synthase (338 aa)
   
  0.567
PUS6
Pseudouridine synthase (303 aa)
   
  0.567
EDP06649
Predicted protein (353 aa)
   
 
  0.551
EDO99796
Predicted protein; GTPase that plays an essential role in the late steps of ribosome biogenesis (446 aa)
   
   
  0.548
NIT1
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria (882 aa)
   
        0.514
EDP07645
Predicted protein (368 aa)
   
      0.507
CBF5
Centromere/microtubule binding protein (435 aa)
   
   
  0.504
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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