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EDP07372 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07372" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07372Predicted protein (188 aa)    
Predicted Functional Partners:
EDP01097
Predicted protein (181 aa)
     
      0.847
DDB1
UV-damaged DNA binding complex subunit 1 protein (1147 aa)
     
      0.587
EDO97028
Predicted protein (413 aa)
     
        0.569
EDO99394
Predicted protein (268 aa)
     
        0.563
UTP1
Nucleolar protein, component of the U3 processome (996 aa)
     
        0.550
EDO98201
Predicted protein (437 aa)
     
        0.545
EDP03163
Predicted protein (514 aa)
   
        0.544
RNPH3
3’-5’ exoribonuclease PH component of the exosome (296 aa)
     
        0.537
EDP03165
Predicted protein (330 aa)
     
      0.528
TRM7
tRNA-2’-O-ribose methyltransferase; Methylates the 2’-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs (323 aa)
     
        0.514
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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