STRINGSTRING
EDP07389 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07389" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07389Predicted protein (223 aa)    
Predicted Functional Partners:
EDP02216
Predicted protein (1483 aa)
     
        0.478
EDP09282
Predicted protein (1399 aa)
     
        0.477
EDP03237
Predicted protein (2742 aa)
     
        0.475
CGL58
Predicted protein (410 aa)
     
        0.475
TRP6
Transient receptor potential ion channel protein (2341 aa)
     
        0.475
CDPKK2
Calcium/calmodulin dependent protein kinase kinase 2 (291 aa)
   
   
0.458
EDP00002
Predicted protein (277 aa)
   
        0.454
EDO99144
Predicted protein (397 aa)
   
          0.446
EDO99416
Predicted protein (343 aa)
   
          0.432
EDP07625
Predicted protein (400 aa)
   
        0.428
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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