STRINGSTRING
EDP07402 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07402" - Predicted protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07402Predicted protein (410 aa)    
Predicted Functional Partners:
EDP02014
Predicted protein (604 aa)
       
 
  0.963
EDO99099
Predicted protein (507 aa)
     
      0.839
VPS35
Subunit of retromer complex (739 aa)
       
      0.626
EDO99679
Predicted protein (379 aa)
       
      0.626
EDO98295
Predicted protein (142 aa)
     
      0.563
EDP06883
Predicted protein (197 aa)
     
        0.476
EDP07075
Predicted protein (152 aa)
     
        0.475
EDP03665
Predicted protein (400 aa)
       
      0.465
EDP07564
Predicted protein (93 aa)
     
        0.429
SUS1
Predicted protein; Involved in mRNA export coupled transcription activation by association with both the TREX-2 and the SAGA complexes. The transcription regulatory histone acetylation (HAT) complex SAGA is a multiprotein complex that activates transcription by remodeling chromatin and mediating histone acetylation and deubiquitination. Within the SAGA complex, participates to a subcomplex that specifically deubiquitinates histones. The SAGA complex is recruited to specific gene promoters by activators, where it is required for transcription. The TREX-2 complex functions in docking exp [...] (104 aa)
           
  0.424
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
Server load: low (6%) [HD]