STRINGSTRING
EDP07455 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07455" - Lysine decarboxylase in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07455Lysine decarboxylase (594 aa)    
Predicted Functional Partners:
CGL48
Lysine decarboxylase-like protein (158 aa)
     
   
  0.791
EDO98972
Predicted protein (314 aa)
       
 
  0.649
EDO97838
Predicted protein (499 aa)
       
 
  0.649
SPS1
Spermine synthase (375 aa)
       
  0.601
SPD1
Spermidine synthase (318 aa)
       
  0.601
COX10
Cytochrome c oxidase assembly protein (276 aa)
   
   
  0.599
EDO97202
Asparagine synthase (578 aa)
           
  0.538
ADH1
Dual function alcohol dehydrogenase / acetaldehyde dehydrogenase (954 aa)
         
  0.518
MCP1
Molybdenum cofactor carrier protein (165 aa)
           
  0.499
FUM2
Fumarate hydratase (546 aa)
           
  0.495
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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