STRINGSTRING
APG3 protein (Chlamydomonas reinhardtii) - STRING interaction network
"APG3" - Autophagy protein in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
APG3Autophagy protein (306 aa)    
Predicted Functional Partners:
APG7
Autophagy protein (605 aa)
     
  0.998
APG8
Autophagy protein (134 aa)
     
  0.990
APG5
Autophagy protein; Required for autophagy (234 aa)
     
  0.986
APG12
Autophagy protein; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation (91 aa)
     
  0.982
APG6
Autophagy protein (495 aa)
     
  0.929
APG4
Autophagy protein (484 aa)
     
 
  0.908
UBC1
Ubiquitin activating enzyme E1 (411 aa)
     
  0.900
EDP09075
Predicted protein (329 aa)
     
  0.900
UBA1
Ubiquitin-activating enzyme E1 (1061 aa)
     
  0.897
EDO99985
Predicted protein (404 aa)
     
  0.894
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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