STRINGSTRING
EIF5A protein (Chlamydomonas reinhardtii) - STRING interaction network
"EIF5A" - Eukaryotic initiation factor in Chlamydomonas reinhardtii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EIF5AEukaryotic initiation factor (165 aa)    
Predicted Functional Partners:
RPL15
Ribosomal protein L15 (204 aa)
     
   
  0.986
RPL38
Ribosomal protein L38 (69 aa)
     
        0.981
DHS1
Deoxypusine synthase 1 (371 aa)
   
  0.979
EDP01029
Predicted protein (389 aa)
   
  0.979
PRPS5
Plastid ribosomal protein S5 (673 aa)
     
 
  0.892
XPO1
Exportin (1075 aa)
     
 
  0.881
RPS2
Ribosomal protein S2 (274 aa)
     
 
  0.874
DOH1
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)- L-lysine intermediate to form hypusine, an essential post- translational modification only found in mature eIF-5A factor (319 aa)
     
  0.848
PRO1
Profilin (131 aa)
     
 
  0.845
RPL11
Ribosomal protein L11 (178 aa)
     
   
  0.836
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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