STRINGSTRING
EDP07560 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07560" - Histone deacetylase in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07560Histone deacetylase (384 aa)    
Predicted Functional Partners:
EDP03175
Histone methyltransferase (1708 aa)
   
  0.915
SET4
Histone methyltransferase (2983 aa)
   
  0.915
EDP00599
Nucleosome remodeling factor (418 aa)
     
  0.891
EDO96788
SIN3 component of histone deacetylase complex (542 aa)
     
  0.885
EDP08347
Histone acetyltransferase (517 aa)
     
  0.852
EDO98539
Histone deacetylase (339 aa)
   
0.815
EDO96250
Histone deacetylase (273 aa)
   
0.813
EDP02188
Histone deacetylase (419 aa)
   
0.808
EDP01149
Histone deacetylase (418 aa)
   
0.803
EDP08975
Histone H3 (135 aa)
     
  0.800
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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