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RPE2 protein (Chlamydomonas reinhardtii) - STRING interaction network
"RPE2" - Ribulose phosphate-3-epimerase in Chlamydomonas reinhardtii
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RPE2Ribulose phosphate-3-epimerase (254 aa)    
Predicted Functional Partners:
TRK1
Transketolase (718 aa)
 
  0.993
RPI2
Ribose-5 phosphate isomerase-related protein (291 aa)
   
  0.970
RPI1
Ribose-5-phosphate isomerase (269 aa)
   
  0.970
PRK1
Phosphoribulokinase (375 aa)
   
 
  0.969
GND1a
6-phosphogluconate dehydrogenase, decarboxylating (566 aa)
   
  0.959
RPE1
Ribulose phosphate-3-epimerase, chloroplast precursor (265 aa)
   
   
0.821
GSN1
Glutamate synthase, NADH-dependent (2201 aa)
   
 
  0.775
ADC1
Aminodeoxychorismate synthase (724 aa)
         
  0.749
GSF1
Ferredoxin-dependent glutamate synthase (1552 aa)
   
 
  0.747
FAP42
Flagellar associated protein, adenylate/guanylate kinase-like protein (2457 aa)
   
 
  0.737
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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