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EDP07570 protein (Chlamydomonas reinhardtii) - STRING interaction network
"EDP07570" - Transcription initiation factor in Chlamydomonas reinhardtii
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP07570Transcription initiation factor (122 aa)    
Predicted Functional Partners:
EDP09795
Global transcription factor (1188 aa)
       
  0.987
RPB1
DNA-directed RNA polymerase II, largest subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1789 aa)
     
  0.981
RPB6
Subunit of DNA-directed RNA polymerase (87 aa)
     
  0.973
RPB3
DNA-directed RNA polymerase II, 36 kDa polypeptide (275 aa)
     
  0.953
RPB9
DNA-directed RNA polymerase II, 14.5 kDa polypeptide; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (118 aa)
     
  0.950
RPB11
DNA-directed RNA polymerase II, 13.6 kDa polypeptide (115 aa)
     
  0.949
RPB5
DNA-directed RNA polymerase II, 23 kDa polypeptide (206 aa)
     
  0.926
RPB7A
DNA-directed RNA polymerase II, 19 kDa polypeptide (176 aa)
     
  0.925
EDP00055
Glycine rich protein (1032 aa)
     
 
  0.912
RPB2
DNA-directed RNA polymerase II, 135 kDa polypeptide; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1634 aa)
       
  0.909
Your Current Organism:
Chlamydomonas reinhardtii
NCBI taxonomy Id: 3055
Other names: C. reinhardtii, Chlamydomonadaceae, Chlamydomonadales, Chlamydomonas, Chlamydomonas reinhardtii, Chlamydomonas reinhardtii P.A.Dangeard, Chlamydomonas smithii, Chlamydomonas smithii R.W.Howshaw & H.Ettl, Chlorophyceae, Volvocales, Volvocida
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